Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015890159.1_cds_XP_016444820.1_39843
CDS Infomation

[gene=LOC107770068] [db_xref=GeneID:107770068] [protein=probable beta-D-xylosidase 7] [protein_id=XP_016444820.1] [location=join(74156..74566,75239..75541,76018..76187,76292..76389,77158..77922,78007..78593)] [gbkey=CDS]
Sequence

ATGGGACGCCCAATAACTGATGAAGTTGTCACCTTTATCTTCTTCTTCCTCAGTTGTATG
CTCTTTATCAGCACTGAGTCAACTCAGCCTCCATTTTCATGTGACTCGTCAAACTCAGTT
ACCAGTTCATTTCCCTTCTGTAACAACTCCTTACCCATCCCCCAAAGGGTACATGACCTC
GTATTACGCCTTACGTTGGACGAGAAAATACTACAGCTGGTTAATGCGGCACCGGAGATA
CCTCGACTCGGTATCTCCGCCTATGAATGGTGGTCGGAGGGTTTACACGGCGTTTCTAGG
CATGGTAAAGGCACGCTTTTCAATGGCACTATTAAGGCTGCCACTATGTTCCCTCAGATC
ATTTTAACCGCTTCTACCTTTGATGAAAATCTCTGGTATCGTATTGCTCAGGCAATTGGA
AAAGAGGCAAGAGCGGTATACAATGCAGGTCAGCTAAAGGGGATGACATTATGGGCACCA
AATATAAACATATTTAGGGACCCAAGGTGGGGAAGAGGGCAAGAAACACCAGGGGAAGAT
CCTATGATGGTGGGAAAATATGGAGTTGCTTATGTAAGAGGACTTCAAGGTGATAGTTTT
GAAGGTGGGAAACTTCAGGATGGACATCTTCAAGCTTCAGCTTGTTGTAAGCACTTCATT
GCTCAGGATTTGGATAATTGGTATAACTTCAGTCGTTACACCTTCGATGCTCACGTCATG
AAGCAGGATTTGGCAGATTCATATGAACCACCCTTCAAGAGTTGCGTCGAACAAGGGAAA
GCAAGCAGTCTAATGTGTGCTTACAATCTTGTTAATGGGATCCCAAATTGTGCCAACTTT
GATCTTCTGACCACAACTGCCCGTGAACATTGGGGTTTCCAAGGGTACATTGTATCTGAT
TGTGACGCAGTTGCTATTATGCATACTCATCAAGGCTATGCTAAAGAACCAGAAGATGCA
GTAGCTGCTACTCTCAGAGCTGGCATGGATGTGAATTGTGGTTCCTACTTGAAGTCATAC
ACAAAATCAGCTTTAGAAAAGCAGAAAGTAAAAGAATCTGACATAGACAGAGCTCTTCAC
AATCTCTTCTCCATTAGAACGAGGCTAGGACTGTTCAATGGTGACCCAAAAAAACTGGAA
TATGGAGACATTTCTTCAGTAGAGGTTTGTAGTCAAGAGCACCGGGCACTAGCCCTCGAA
GCAGCAAGAAATGGCATTGTCCTTCTAAAGAATTCTGCCAAACTCCTTCCACTTTCAAAG
ATCAAAACAACATCCCTTGCTGTAATAGGTCCTAAAGCAAATGATTCCGAAGTACTTTTA
GGTAACTACGAAGGCTATCCTTGCAAGAATGTTACATTACTCCAAGGACTTCAGGAGTAT
GTTAAAAACACAACGTACCATCCGGGCTGCAATTTCGTCAACTGTACTTCTGCTGCAATA
GATGAAGCAGTTGACATAGCGAAAAAAGCAGACTATGTTGTTCTAATAATGGGATTGGAC
CAGACTCTTGAAAGAGAGAAGCTTGATCGCACGGAATTGGGACTACCTGGTATGCAAGAG
AGTCTCATTACAGCGATTGTGCAAGCTGCCCCAAAACCTGTTATACTGGTTTTGATGTGT
GGAGGTCCAGTGGATGTGTCCTTTGCAAAGGAAAACCAAAATATAGGAGCCATTTTGTGG
GTTGGTTACCCTGGTGAGGGTGGAGCTACTGCATTGGCCGAGATACTTTTTGGCGAACAC
AATCCAGGGGGTAAATTACCAGTCACTTGGTACCCTAAGGAATTCAACAAAATATCAATG
ACAGACATGAGGATGCGGCCTCTATCATCCACGGGATATCCAGGGCGCACTTACAGATTC
TACAATGGGCCAAAAGTTTTCGAATTTGGTTACGGTCTCAGCTACACTGATTATTCTTAC
GCGTTCGCCTCTGTCAACCAAGATAAGCTGCATTTCAAGAACCTGAAGGTCAATAAGGCA
ACTGAAAATGGTTCTGCTCTGAGCATTGATGTTTCAGACGTTGGATCAGAAGTATGCAAC
AACGCGATGATCGCAGTTAAAGTTGCCGTGAAAAACCAGGGAGAAATGGCTGGTAAGCAC
CCCCTATTGTTGTTTCTGAGGCATTCCAGCACAATGGATGAGATTCCAAGAAAGACTTTG
ATAGGATTCAAGAGTGTAAATTTGGAAGCAAGGGAAAGTACTCATATTGCATTTGATGTG
AAACCTTGTGAGCACTTTACAAGGGCTAATAGATATGGTTCATTAGTTATTGATGAAGGG
AAATATTTCCTTCTTGTGGGAGATAAGGAATATCCTGTTACAGTATTTGGGTGA

Peptide Sequence

PEP ID

XP_016444820.1
PEP Infomation

PREDICTED: probable beta-D-xylosidase 7 [Nicotiana tabacum]
Sequence

MGRPITDEVVTFIFFFLSCMLFISTESTQPPFSCDSSNSVTSSFPFCNNSLPIPQRVHDL
VLRLTLDEKILQLVNAAPEIPRLGISAYEWWSEGLHGVSRHGKGTLFNGTIKAATMFPQI
ILTASTFDENLWYRIAQAIGKEARAVYNAGQLKGMTLWAPNINIFRDPRWGRGQETPGED
PMMVGKYGVAYVRGLQGDSFEGGKLQDGHLQASACCKHFIAQDLDNWYNFSRYTFDAHVM
KQDLADSYEPPFKSCVEQGKASSLMCAYNLVNGIPNCANFDLLTTTAREHWGFQGYIVSD
CDAVAIMHTHQGYAKEPEDAVAATLRAGMDVNCGSYLKSYTKSALEKQKVKESDIDRALH
NLFSIRTRLGLFNGDPKKLEYGDISSVEVCSQEHRALALEAARNGIVLLKNSAKLLPLSK
IKTTSLAVIGPKANDSEVLLGNYEGYPCKNVTLLQGLQEYVKNTTYHPGCNFVNCTSAAI
DEAVDIAKKADYVVLIMGLDQTLEREKLDRTELGLPGMQESLITAIVQAAPKPVILVLMC
GGPVDVSFAKENQNIGAILWVGYPGEGGATALAEILFGEHNPGGKLPVTWYPKEFNKISM
TDMRMRPLSSTGYPGRTYRFYNGPKVFEFGYGLSYTDYSYAFASVNQDKLHFKNLKVNKA
TENGSALSIDVSDVGSEVCNNAMIAVKVAVKNQGEMAGKHPLLLFLRHSSTMDEIPRKTL
IGFKSVNLEARESTHIAFDVKPCEHFTRANRYGSLVIDEGKYFLLVGDKEYPVTVFG

Transcript Sequence

Gene sequence data has not been registered.